SEQUENCE TABLE

Searched by: Experimental

Species	Taxonomical Group	Optimal Sequence Found	Sequence Context																					Total Number of Genes	Reference
Species	Taxonomical Group	Optimal Sequence Found	-10	-9	-8	-7	-6	-5	-4	-3	-2	-1	1	2	3	4	5	6	7	8	9	10	11	Total Number of Genes	Reference
Rattus norvegicus (Rat); Cercopithecus aethiops (African green monkey)	Animals/ Vertebrates	ACCAUGG	A	G	C	U	U	C	C	A	N	N	A	U	G	G	C	C	C	U	G	U	G	66	Kozak 1986
Rattus norvegicus (Rat); Cercopithecus aethiops (African green monkey)	Animals/ Vertebrates	ACCAUGG	A	G	C	U	U	G	G	N	U	U	A	U	G	G/U	C	C	C	U	G	U	G	66	Kozak 1986
Rattus norvegicus (Rat); Cercopithecus aethiops (African green monkey)	Animals/ Vertebrates	ACCAUGG	A	G	C	U	U	G	G	A/G	N	N	A	U	G	U	C	C	C	U	G	U	G	66	Kozak 1986
Rattus norvegicus (Rat); Cercopithecus aethiops (African green monkey)	Animals/ Vertebrates	ACCAUGG	G	C	U	G	C	C	A/C	A/C	A/C	C	A	U	G	U	C							66	Kozak 1986
Rattus norvegicus (Rat); Cercopithecus aethiops (African green monkey)	Animals/ Vertebrates	ACCAUGG	G	C	U	G	C	U	U	A/C	U	U	A	U	G	U	C							66	Kozak 1986
Rattus norvegicus (Rat); Cercopithecus aethiops (African green monkey)	Animals/ Vertebrates	ACCAUGG	G	C	U	G	C	U	A/U	U	A/U	U	A	U	G	U	C							66	Kozak 1986
Rattus norvegicus (Rat); Cercopithecus aethiops (African green monkey)	Animals/ Vertebrates	ACCAUGG	G	G	U	G	C	U/C	U/C	U	U/C	U/C	A	U	G	U	C							66	Kozak 1986
Rattus norvegicus (Rat); Cercopithecus aethiops (African green monkey)	Animals/ Vertebrates	ACCAUGG	U	U	A	U	G	N	C	A	C	C	A	U	G	G	U	A	G	U				66	Kozak 1986
Rattus norvegicus (Rat); Cercopithecus aethiops (African green monkey)	Animals/ Vertebrates	ACCAUGG	U	U	A/C	U	G	U	C	A	C	C	A	U	G	G	U	A	G	U				66	Kozak 1986
Rattus norvegicus (Rat); Cercopithecus aethiops (African green monkey)	Animals/ Vertebrates	ACCAUGG	U/C	U/C	A	U	G	U	C	A	C	C	A	U	G	G	U	A	A	U				66	Kozak 1995
Oryctolagus cuniculus (Rabbit)	Animals/ Vertebrates	GCCAUCAUGGG	U	U	C	U	G	C	C	N	U	C	A	U	G	G	G	U	A	C				4	Lutcke 1987
Oryctolagus cuniculus (Rabbit)	Animals/ Vertebrates	(A/G)(C/A)AAUGG								N	N	N	A	U	G	N								147	Hernández 2024
Danio rerio (Zebra fish)	Animals/ Vertebrates	GCAAACAUGG					G	C	C	A	C	C	A	U	G	G								5	Grzegorski 2014
Danio rerio (Zebra fish)	Animals/ Vertebrates	GCAAACAUGG					G	C	A	G	U	C	A	U	G	G								5	Grzegorski 2014
Danio rerio (Zebra fish)	Animals/ Vertebrates	GCAAACAUGG					C	U	U	U	C	U	A	U	G	C								5	Grzegorski 2014
Danio rerio (Zebra fish)	Animals/ Vertebrates	GCAAACAUGG					C	G	U	U	G	U	A	U	G	C								5	Grzegorski 2014
Human/ HEK 293T cells	Animals/ Vertebrates	GCCACCAUGG					G	C	C	A/G	C	C	A	U	G	A/G								16	Ivanov 2010
Human/ HEK 293T cells	Animals/ Vertebrates	(A/G)(U/C)(A/C)(A/G)(A/C)(A/C/G)AUGGC					N	N	N	N	N	N	A	U	G	N	N							65536	Noderer 2014
Mouse/ CHO cells	Animals/ Vertebrates	GAAGUAUGAGA						N	N	N	N	N	A	U	G	N	G	A						111	Blanco 2019
Bombyx mori (silkworm)	Animals/ Invertebrates	AAAAAUCAAAAAUGG	A	A	A	A	A	U	C	C	G	U	A	U	G	G								14	Tatematsu 2014
Bombyx mori (silkworm)	Animals/ Invertebrates	AAAAAUCAAAAAUGG	C	C	G	G	C	G	G	C	G	U	A	U	G	G								14	Tatematsu 2014
Bombyx mori (silkworm)	Animals/ Invertebrates	AAAAAUCAAAAAUGG	C	C	G	G	C	G	G	A	C	C	A	U	G	G								14	Tatematsu 2014
Bombyx mori (silkworm)	Animals/ Invertebrates	AAAAAUCAAAAAUGG	G	A	C	C	G	C	C	A	A	C	A	U	G	G								14	Tatematsu 2014
Bombyx mori (silkworm)	Animals/ Invertebrates	AAAAAUCAAAAAUGG	C	G	C	C	G	C	C	A	C	C	A	U	G	G								14	Tatematsu 2014
Bombyx mori (silkworm)	Animals/ Invertebrates	AAAAAUCAAAAAUGG	C	C	G	G	C	G	G	A	A	U	A	U	G	A								14	Tatematsu 2014
Drosophila melanogaster	Animals/ Invertebrates	AAAAAUCAAAAAUGG								N	N	N	A	U	G	N								147	Hernández 2024
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	AAUUANNAUGUCU				A	A	U	U	N	N	N	A	U	G	U	C	U						47	Looman & Kuivenhoven 1993
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	NAANAAUGGC						N	N	N	N	N	A	U	G	N	N							1735	Robbins-Pianka 2010
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	NNN(U/C)N(A/C)AUGNNN					N	N	N	N	N	N	A	U	G	N	N	N						400	Pop 2014
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	TCTGCAATAAUGAG		T	C	T	A	G	A	A	A	A	A	U	G	A	G	T	A	A	A	G	G	4096	Xu 2021
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	TCTGCAATAAUGAG		T	C	T	A	T	T	A	T	T	A	U	G	A	G	T	A	A	A	G	G	4096	Xu 2021
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	TCTGCAATAAUGAG		T	C	T	A	T	C	G	T	C	A	U	G	A	G	T	A	A	A	G	G	4096	Xu 2021
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	TCTGCAATAAUGAG		T	C	T	A	C	T	A	C	A	A	U	G	A	G	T	A	A	A	G	G	4096	Xu 2021
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	TCTGCAATAAUGAG		T	C	T	A	T	C	T	A	G	A	U	G	A	G	T	A	A	A	G	G	4096	Xu 2021
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	TCTGCAATAAUGAG		T	C	T	C	C	A	A	G	C	A	U	G	A	G	T	A	A	A	G	G	4096	Xu 2021
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	TCTGCAATAAUGAG		T	C	T	G	T	C	A	A	C	A	U	G	A	G	T	A	A	A	G	G	4096	Xu 2021
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	TCTGCAATAAUGAG		T	C	T	C	A	C	C	A	A	A	U	G	A	G	T	A	A	A	G	G	4096	Xu 2021
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	TCTGCAATAAUGAG		T	C	T	T	C	A	G	C	A	A	U	G	A	G	T	A	A	A	G	G	4096	Xu 2021
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	TCTGCAATAAUGAG		T	C	T	A	C	G	A	A	G	A	U	G	A	G	T	A	A	A	G	G	4096	Xu 2021
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	TCTGCAATAAUGAG		T	C	T	G	C	A	A	A	G	A	U	G	A	G	T	A	A	A	G	G	4096	Xu 2021
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	TCTGCAATAAUGAG		T	C	T	T	C	A	A	C	A	A	U	G	A	G	T	A	A	A	G	G	4096	Xu 2021
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	TCTGCAATAAUGAG		T	C	T	C	C	A	A	C	C	A	U	G	A	G	T	A	A	A	G	G	4096	Xu 2021
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	TCTGCAATAAUGAG		T	C	T	A	T	A	A	C	C	A	U	G	A	G	T	A	A	A	G	G	4096	Xu 2021
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	TCTGCAATAAUGAG		T	C	T	G	C	A	A	T	A	A	U	G	A	G	T	A	A	A	G	G	4096	Xu 2021
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	N(A/C)AA(A/G)AUG						A	A	A	A	A	A	U	G									489348	Cuperus 2017
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	N(A/C)AA(A/G)AUG						G	C	A	A	G	A	U	G									489348	Cuperus 2017
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	N(A/C)AA(A/G)AUG						T	C	A	A	G	A	U	G									489348	Cuperus 2017
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	N(A/C)AA(A/G)AUG						A	T	A	A	G	A	U	G									489348	Cuperus 2017
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	N(A/C)AA(A/G)AUG						C	A	A	G	A	A	U	G									489348	Cuperus 2017
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	N(A/C)AA(A/G)AUG						A	C	A	A	G	A	U	G									489348	Cuperus 2017
Saccharomyces cerevisiae (Budding yeast)	Fungi/ Ascomycete	(U/A)(U/C)CAUGA								N	N	N	A	U	G	N								120	Hernández 2024
Nicotiana tabacum (Tobacum)	Plants	A(A/G)AAAUGGCC							A	G	A	A	A	U	G	G	C							16	Lukaszewicz 2000
Nicotiana tabacum (Tobacum)	Plants	A(A/G)AAAUGGCC							A	G	C	A	A	U	G	G	C							16	Lukaszewicz 2000
Nicotiana tabacum (Tobacum)	Plants	A(A/G)AAAUGGCC							A	A	A	C	A	U	G	G	C							16	Lukaszewicz 2000
Nicotiana tabacum (Tobacum)	Plants	A(A/G)AAAUGGCC							A	G	C	C	A	U	G	G	C							16	Lukaszewicz 2000
Nicotiana tabacum (Tobacum)	Plants	A(A/G)AAAUGGCC							U	C	G	U	A	U	G	C	U							16	Lukaszewicz 2000
Nicotiana tabacum (Tobacum)	Plants	A(A/G)AAAUGGCC							A	A	A	A	A	U	G	C	U							16	Lukaszewicz 2000
Nicotiana tabacum (Tobacum)	Plants	A(A/G)AAAUGGCC							G	U	U	G	A	U	G	A	A							16	Lukaszewicz 2000
Nicotiana tabacum (Tobacum)	Plants	A(A/G)AAAUGGCC							U	C	C	U	A	U	G	C	C							16	Lukaszewicz 2000
Arabidopsis thaliana (Thale cress)	Plants	(A/G)(A/C)(A/G)AUGU	U	C	A	G	U	C	C	N	N	N	A	U	G	U	U	A	A	G	G			64	Sugio 2010
Arabidopsis thaliana (Thale cress)	Plants	aaaaaaaA/GaaAUGGc	A	A	A	A	A	A	A	A/G	A	A	A	U	G	G	C							7870	Kawaguchi 2005
Arabidopsis thaliana (Thale cress)	Plants	TAGGGTTT/AAAACCCTAUG	N	N	N	N	N	N	N	N	N	N	A	U	G									25 genes	Kim 2014
Picea abies (Norway spruce)	Gymnospernae								A	G	A	A	A	U	G	G	C							16	Lukaszewicz 2000
Picea abies (Norway spruce)	Gymnospernae								A	A	C	A	A	U	G	G	C							16	Lukaszewicz 2000
Picea abies (Norway spruce)	Gymnospernae								A	A	A	C	A	U	G	G	C							16	Lukaszewicz 2000
Zea mays (corn)	Monocotyledons	A(A/G)CCAUGGC							A	A	C	C	A	U	G	G	C							16	Lukaszewicz 2000
Zea mays (corn)	Monocotyledons	A(A/G)CCAUGGC							U	C	G	U	A	U	G	C	U							16	Lukaszewicz 2000
Zea mays (corn)	Monocotyledons	A(A/G)CCAUGGC							A	A	A	A	A	U	G	C	U							16	Lukaszewicz 2000
Zea mays (corn)	Monocotyledons	A(A/G)CCAUGGC							U	C	C	U	A	U	G	C	C							16	Lukaszewicz 2000
Zea mays (corn)	Monocotyledons	A(A/G)CCAUGGC							G	U	U	G	A	U	G	A	A							16	Lukaszewicz 2000
Triticum aestivum (wheat)	Monocotyledons	GCCNUCAUGGG	U	U	C	U	G	C	C	N	U	C	A	U	G	G	G	U	A	C				4	Lutcke 1987
Triticum aestivum (wheat)	Monocotyledons	(A/C)(C/A)CAUGU								N	N	N	A	U	G	N								147	Hernández 2024
Oryza sativa (Rice)	Monocotyledons	(A/G)(U/C)(G/C)AUGU	U	C	A	G	U	C	C	N	N	N	A	U	G	U	U	A	A	G	G			64	Sugio 2010